BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H01LP1|AL430608
(289 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 558 e-159
>3x_Contig1619
Length = 7770
Score = 558 bits (279), Expect = e-159
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 3 catagaaactataattcaatcggttagaatagtattttgataaggtaccaatataggttc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382 catagaaactataattcaatcggttagaatagtattttgataaggtaccaatataggttc 4323
Query: 63 aattcctattagtttcatatatatttaaatggatggttgactgagtggtttaaggtgtaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4322 aattcctattagtttcatatatatttaaatggatggttgactgagtggtttaaggtgtaa 4263
Query: 123 tacttgagatattataagtcttttaggcttcgtaggttcaaatcctacatcattcgtata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4262 tacttgagatattataagtcttttaggcttcgtaggttcaaatcctacatcattcgtata 4203
Query: 183 taatataatamtaatatatagtattatatattasmcacgccacctgatactattagtatc 242
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4202 taatataatactaatatatagtattatatattacccacgccacctgatactattagtatc 4143
Query: 243 aggtggctttaataattcattgaattatttacgaaatatatatat 287
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4142 aggtggctttaataattcattgaattatttacgaaatatatatat 4098
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2590
Number of Sequences: 1807
Number of extensions: 2590
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 289
length of database: 10,358,551
effective HSP length: 15
effective length of query: 274
effective length of database: 10,331,446
effective search space: 2830816204
effective search space used: 2830816204
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.5 bits)